| Project ID | Title | Publication | Instrument | Description | Notes |
|---|---|---|---|---|---|
| PRJNA354889 | Hordeum vulgare subsp. vulgare Transcriptome or Gene expression | Transcriptional Dynamics of Grain Development in Barley (Hordeum vulgare L.) | Illumina HiSeq 2000 | Barley is a well-studied model of cereal grain development and maturation. To better understand the molecular basis for barley grain development, we performed a comparative study of transcriptome and small RNAs dynamics between four developmental phases of this process: early pre-storage phase (0-5 DAP), late pre-storage or transition phase (6-10 DAP), early storage phase (11-15 DAP) and levels off stages (16-20 DAP). | 0-5 DAP/6-10 DAP/11-15 DAP/16-20 DAP |
| PRJNA389146 | Sequencing of barley embryonic microRNAs | MicroRNAs participate in gene expression regulation and phytohormone cross-talk in barley embryo during seed development and germination | Illumina HiSeq 2000 | Sequencing of barley embryonic microRNAs at three different stages: Seed-1DAG, Seed-5DAG and Embryo-10DPA. | Seed-1DAG, Seed-5DAG and Embryo-10DPA |
| PRJNA634514 | Small RNA (sRNA) and parallel analysis of RNA ends (PARE) analysis during the early stage of gametic embryogenesis in barley | The commitment of barley microspores into embryogenesis correlates with miRNA-directed regulation of members of the SPL, GRF and HD-ZIPIII transcription factor families | Illumina HiSeq 2500 | Small RNA (sRNA) and parallel analysis of RNA ends (PARE) sequencing data. The scope of this data consists to study the regulatory activity of micro RNA (miRNA) during the early stages of microspore development in gametic embryogenesis in barley using the embryogenic-responsive cultivar Gobernadora. | Embryogenic-responsive |
| PRJNA636099 | sRNA and RNA sequencing profile of barley and wheat anther | Premeiotic, 24-Nucleotide Reproductive PhasiRNAs Are Abundant in Anthers of Wheat and Barley But Not Rice and Maize | NextSeq 550 | Two classes of pre-meiotic (21-nt) and meiotic (24-nt) phasiRNAs and their patterns of accumulation, have been described in maize and rice anthers. Their precise function remains unclear but some studies have shown that they support male fertility. Their important role in anthers underpins our current study to characterize phasiRNAs in wheat and barley anthers. We staged anthers at every 0.2 mm of development for one wheat and two barley varieties. We identified pre-meiotic (0.2 mm, 0.4 mm and 0.6 mm), meiotic (0.8 mm, 1.0 mm and 1.4 mm) and post-meiotic (1.8 mm) anthers for which we then investigated accumulation patterns of RNAs, including reproductive phasiRNAs. | Pre-meiotic、post-meiotic and reproductive |
| PRJNA816439 | miRNA-barley | - | Illumina HiSeq 2500 | miRNA from illumina platform, SAM at double ridge and triple mound stage, barley, cultivar Morex. | Double ridge and triple mound stage |
| PRJNA691038 | Barley seeds miRNome stability during long-term storage and aging | Barley Seeds miRNome Stability during Long-Term Storage and Aging | Illumina MiSeq | Seed aging is a complex biological process attracting the scientists’ attention for many years. High-throughput small RNA sequencing was applied to examine microRNAs contribution in barley seeds senescence. Unique samples of seeds that despite the same genetic makeup differed in viability after over 45 years of storage in a dry state were investigated. In total, 61 known and 81 novel miRNA were identified in dry seeds. The highest level of expression was found in four conserved miRNA families i.e. miR159, miR156, miR166 and miR168. However, the most astonishing result was the lack of significant differences in the level of almost all miRNAs in seed samples with significantly different viability. This result reveals that miRNAs in dry seeds are extremely stable. This is also the first identified RNA fraction that is not deteriorating along to the loss of seed viability. Moreover, the novel miRNA hvu-new41, with higher expression in seeds with the lowest viability was detected by RT-qPCR, has the potential to become an indicator of the decreasing viability of seeds during storage in a dry state. It might be responsible for the removal of (1-3.1-4)-beta-D-glucanase transcripts and lowering or completely blocking the synthesis of this key enzyme for seed germination. Overall design: Examiantiopn of 3 barley seeds stocks: Rc - after seed regeneration i.e. non-stored control; Lv - seeds after storage 1972-2018 (germination 2%); Hv - seeds after storage 1972-2018 (germination 86,7%). | Seed aging |
| Project ID | Title | Publication | Instrument | Description | Notes |
|---|---|---|---|---|---|
| PRJNA294348 | Hordeum vulgare subsp. vulgare Transcriptome or Gene expression | Global Identification of MicroRNAs and Their Targets in Barley under Salinity Stress | Illumina HiSeq 2000 | sRNA sequencing of barley under salt stress. | Salt stress |
| PRJNA481620 | Hordeum vulgare Genome sequencing | Identification of microRNAs in response to aluminum stress in the roots of Tibetan wild barley and cultivated barley | Illumina HiSeq 2500 | Up to date, there is no report about sequencing and identification of miRNA responsive to Al stress in barley. Thus, this study could provide useful information for revealing molecular mechanism of miRNAs in regulating Al tolerance in barley. | Aluminum stress |
| PRJNA485436 | A wild barley accession WB-1 and a barley cultivar Golden Promise Raw sequence reads | Identification of microRNAs Responding to Aluminium, Cadmium and Salt Stresses in Barley Roots | Illumina HiSeq 2500 | 16 small RNA libraries of shoot and root tissues from a wild barley accession (WB-1) and a cultivar Golden Promise with contrasting Cd tolerance were constructed and sequenced. Moreover, a degradome library was also conducted to identify the target genes of miRNAs. | Aluminium, Cadmium and Salt Stresses |
| PRJNA507337 | Small RNA and degradome sequencing of cultivated barley and Tibetan wild barley | Differential changes in grain ultrastructure, amylase, protein and amino acid profiles between Tibetan wild and cultivated barleys under drought and salinity alone and combined stress. | Illumina HiSeq 2500 | Using small RNA sequencing and degradome analysis to identify microRNAs in response to salt stress in cultivated and Tibetan wild barley. | Drought and salinity alone and combined stress |
| PRJNA526135 | miRNA expression during development and drought stress in barley | A Functional Network of Novel Barley MicroRNAs and Their Targets in Response to Drought | Illumina HiSeq 2500/Illumina HiScanSQ | Combating loss of production due to drought stress is especially important for barley cultivation. With increasing number of data confirming the importance of miRNA-mediated regulation, we have searched for novel barley miRNAs related to drought stress. We performed deep sequencing of small RNAs isolated from developmental stages of barley plants as well as drought stressed plants coupled with degradome analysis. | Drought stress |
| PRJNA607200 | Deep-sequencing of degraded or cleaved RNAs from barley shoot and root growing in low-Pi condition | Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses | Illumina HiSeq 2500 | RNA was isolated from 23 old barley plants (shoots and roots), line Rolap. PARE libraries were constructed for both barley organs, followed by sequencing of NGS libraries. Overall design: Total RNA isolation, PARE libraries preparation, single-reads (50 cycles) sequencing, Illumina technology, HiSeq 2500, sequencing performed at Fasteris SA (Switzerland). | Low-Pi condition |
| PRJNA607205 | Deep-sequencing of small RNAs from barley shoot and root growing in low-Pi and control condition | Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses | Illumina HiSeq 4000 | RNA was isolated from 23 old barley plants (shoots and roots), line Rolap. We used a modified method that allows for enrichment of small RNAs. Libraries were prepared using TruSeq Small RNA Library Preparation Kit (Illumina), followed by sequencing of NGS libraries. Overall design: Total RNA isolation, libraries preparation, single-reads (50 cycles) sequencing, Illumina technology, HiSeq 4000, sequencing performed at Fasteris SA (Switzerland). | Pi-starvation |
| PRJNA608272 | NGS analysis of small RNAs under nitrogen excess stress in shoot and root of 2 week old barley plants | Expression Analysis of Nitrogen Metabolism-Related Genes Reveals Differences in Adaptation to Low-Nitrogen Stress between Two Different Barley Cultivars at Seedling Stage | Illumina HiSeq 4000 | In order to identify microRNAs involved in response to nitrogen excess stress we performed deep sequencing of sRNA libraries constructed form RNA isolated from roots and shoots of two week old barley plants that have been grown under nitrogen excess stress and control conditions. Overall design: barley plants grown under conditions and nitrogen excess stress small RNA sequencing. | Nitrogen excess stress |
| PRJNA682179 | Identification of microRNAs in response to low potassium stress in the shoots of Tibetan wild barley and cultivated barley [miRNA-seq] | Identification of microRNAs in response to low potassium stress in the shoots of Tibetan wild barley and cultivated | Illumina HiSeq 2500 | Soil potassium deficiency has become a global problem in agricultural production, seriously restricting crops productions and agricultural sustainable development. Identification of the microRNAs and understanding their functions in response to low K stress will be helpful for developing crop varieties with low K tolerance. Our previous study identified a low K tolerant accession XZ153 from Tibetan wild barley. In this study, small RNA and degradome analysis were performed on two barley genotypes differing in low K tolerance (XZ153, tolerant; ZD9, sensitive) to identify the miRNAs and their targets responding to low K stress. A total of 1108 miRNAs were detected in shoots of XZ153, and ZD9 at 2 d and 7 d after low K stress, and their targets were identified through bioinformatics prediction and degradome analysis. We identified 65 differentially expressed miRNAs responding to low K stress. The results also showed that miR164c, miR169h and miR395a modules could mediate TCA cycle, glycolysis pathway and pentose phosphate pathway responding to low K stress. The osa-miR166g-3p and ghr-miR482b may act as the regulators in Ca2+ signaling pathway in response to low K stress. The methionine salvage cycle involved in ethylene biosynthesis process mediated by miR396c-3p and osa-miR171e-5p might be also involved in responding to low K stress. Some miRNAs, including miR160a, miR396c and miR169h modules, which participated in photosynthesis regulation under low K stress, differed between the two barley genotypes. In conclusion, these exclusively expressed miRNAs and their targets play the crucial roles in low K tolerance. Overall design: A total of 24 shoot samples (two genotypes × two potassium conditions × two time periods × three replications) were harvested for further RNA isolation and library construction. | Soil potassium deficiency |
| PRJNA237744 | Hordeum vulgare strain:Qasr Ibrim strain Targeted Locus (Loci) | A complete ancient RNA genome: identification, reconstruction and evolutionary history of archaeological Barley Stripe Mosaic Virus | Illumina HiSeq 2500 | sRNA coverage of several genomic loci in archaeological barley (Qasr Ibrim strain) and modern control samples. | Archaeological Barley Stripe Mosaic Virus |
| PRJNA823841 | Small RNA sequencing of BYDV-infected barley plants | Barley GRIK1-SnRK1 kinases subvert a viral virulence protein to upregulate antiviral RNAi and inhibit infection | Illumina HiSeq 2500 | To examine if the elevation of antiviral defense displayed in transgenic barley plants that overexpressing SnRK1-YFP might be associated with the increased abundance of BYDV vsiRNAs, small RNA sequencing assays were conducted to analyze the vsiRNA accumulation levels in BYDV-infected transgenic barley plants and WT controls. The small RNAs were separated from the total RNAs that extracted from the BYDV-infected barley plants at 4, 7 and 14 dpi, and then were employed for constructing the small RNA-Seq library. | BYDV-infected |
| PRJNA809109 | small RNA from barley powdery mildew | Site-specific analysis reveals candidate cross-kingdom small RNAs, tRNA and rRNA fragments, and signs of fungal RNA phasing in the barley–powdery mildew interaction | NextSeq 550 | The aim of this study is to determine the small RNA (sRNA) produced by barley and Blumeria graminis f. sp. hordei. Infected leaves were dissected to separate infection structures, and extracellular vesicles from the plant apoplast. The samples analysed were: epiphytic mycelium and spores; infected barley epidermis; haustoria; microsomes from infected epidermis; extracellular vesicles from infected or non-infected barley leaves. | small RNA (sRNA) produced by barley and Blumeria graminis f. sp. hordei. Infected leaves |
| Project ID | Title | Publication | Instrument | Description | Notes |
|---|---|---|---|---|---|
| PRJDB6438 | Cloning and Functional Analysis Agronomically Important Genes on Barley | miR172 downregulates the translation of cleistogamy 1 in barley | Illumina Genome Analyzer IIx | Cultivars of barley (Hordeum vulgare L.) showing a cleistogamous floret phenotype hold an ability to prevent the plants from infection of various invasive fungi, notably certain Fusarium ssp., and also greatly reduce the risk of gene flow through pollen dispersal. A single recessive gene cleistogamy 1 (cly1) encoding an APETLA2 (AP2) type protein determines the cleistogamy in barley. Within the cly1 gene, sequence variations at the miR172 target site are associated with the lodicule development and then the cleistogamous phenotype. An miRNA library from immature spikes of barley variety Morex is constructed and sequenced to characterize the interaction of miRNA with cly1 gene sequences and indetify the barley miR172 genes through sequence alignment against the Morex whole genome sequence for understanding of the regulation mechanisms on cly1 gene activity as well as its gene product, AP2 protein. | Cleistogamy 1 |
| PRJEB40118 | Small RNA sequencing of a barley powdery mildew susceptible cultivar (cv) Baudin near-isogenic lines (NILs) introgressed with mlo-11 and mlo-11 (cnv2) mutations | Physiological Changes in Barley mlo-11 Powdery Mildew Resistance Conditioned by Tandem Repeat Copy Number | Illumina HiSeq 2500 | Wild barley accessions have evolved broad-spectrum defence against barley powdery mildew through naturally occurring recessive mlo mutations. This research elucidates the pronounced repression of the Mlo promoter in mlo-11 compared to mlo-11 (cnv2) was governed by 24 nt heterochromatic small interfering RNAs. | Mlo mutation |
| PRJNA476756 | Small RNA sequencing of Barley CI 16151 and fast-neutron-derived, immune-compromised mutants infected with the powdery mildew fungus (Blumeria graminis f. sp. hordei (Bgh); isolate 5874) | Biological Roles of Small Rnas Expressed During Infection of Barley by the Obligate Fungal Biotroph, Blumeria graminis f. sp. hordei | Illumina HiSeq 2500 | The powdery mildew fungus, Blumeria graminis, is an obligate biotrophic pathogen of cereals and has significant impact on food security (Dean et al., 2012. Molecular Plant Pathology 13 (4): 414-430. DOI: 10.1111/j.1364-31403.2011.001483.x). Blumeria graminis f. sp. hordei (Bgh) is the causal agent of powdery mildew on barley (Hordeum vulgare L.). We sought to identify small RNAs (sRNAs) from both barley and Bgh that regulate gene expression both within species and cross-kingdom. Overall design: 90 samples analyzed = 5 genotypes * 6 time points * 3 replications Note: This experiment used the identical split-plot design, tissue, and source RNA as GEO submission # 101304 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE101304). | Blumeria graminis |
| PRJNA823894 | Small RNA sequencing of virus-infected barley plants | Barley GRIK1-SnRK1 kinases subvert a viral virulence protein to upregulate antiviral RNAi and inhibit infection | Illumina HiSeq 2500 | To investigate the function of HvSDN1 in regulating the BYDV derivative vsiRNA accumulation, the barley plants with silencing HvSDN1 using BSMV-VIGS (BSMV-SDN1gs) and its control plants (BSMV-EV) were further employed to inoculate the BYDV-GAV, thus producing four groups of plants, i.e., BSMV-EV/BYDV- (without HvSDN1 silencing and free of BYDV), BSMV-SDN1gs/BYDV- (with HvSDN1 silenced and free of BYDV), BSMV-EV/BYDV+ (without HvSDN1 silencing and infected by BYDV), BSMV-SDN1gs/BYDV+ (with HvSDN1 silenced and infected by BYDV). The small RNAs were extracted from the four types of plants at 21 dpi of BYDV and were used to construct the small RNA-Seq library. | BYDV-infected |
| Run | Library Name | Library Selection | Tissue | Cultivar | Sample Name |
|---|---|---|---|---|---|
| SRR1166427 | Control | PCR | Endosperm | PI 564601 | Sinai_eIF4E locus |
| SRR1166403 | Control | PCR | Endosperm | PI 542707 | Dryland_eIF4E |
| SRR1166399 | Control | PCR | Endosperm | PI 510559 | Peru_eIF4E |
| SRR1166398 | Control | PCR | Endosperm | PI 1862613 | Control_Japan_eIF4E |
| SRR1166397 | QI | PCR | Endosperm | Qasr Ibrim strain | QI_eIF4E |
| SRR1166396 | QI | PCR | Endosperm | Qasr Ibrim strain | QI_sukkula |
| SRR1166395 | QI | PCR | Endosperm | Qasr Ibrim strain | QI_Mla |
| SRR1166394 | QI | PCR | Endosperm | Qasr Ibrim strain | QI_Lr34 |
| SRR1166393 | QI | PCR | Endosperm | Qasr Ibrim strain | QI_AGL97 |
| SRR1166379 | QI_LX | PCR | Endosperm | Qasr Ibrim strain | Qasr Ibrim barley, AGL97 |
| Run | Library Name | Library Selection | Age | Tissue | Cultivar | Sample Name | Geographic Location Name | Treatment | Replicate |
|---|---|---|---|---|---|---|---|---|---|
| SRR8265663 | XZ16-S-Salt-2 | RT-PCR | about 25-day-old | Shoot | Tibetan wild barley accession XZ16 | XZ16-S-Salt-2 | China: Qinghai Tibet Plateau | 200mM NaCl | replicate 2 |
| SRR8265664 | XZ16-S-Salt | RT-PCR | about 25-day-old | Shoot | Tibetan wild barley accession XZ16 | XZ16-S-Salt-1 | China: Qinghai Tibet Plateau | 200mM NaCl | replicate 1 |
| SRR8265665 | XZ16-R-Control | RT-PCR | about 25-day-old | Root | Tibetan wild barley accession XZ16 | XZ16-R-Control-1 | China: Qinghai Tibet Plateau | control | replicate 1 |
| SRR8265667 | GP-R-Control-2 | RT-PCR | about 25-day-old | Root | Golden Promise | GP-R-Control-2 | - | control | replicate 2 |
| SRR8265668 | XZ16-R-Control-2 | RT-PCR | about 25-day-old | Root | Tibetan wild barley accession XZ16 | XZ16-R-Control-2 | China: Qinghai Tibet Plateau | control | replicate 2 |
| SRR8265669 | GP-R-Control | RT-PCR | about 25-day-old | Root | Golden Promise | GP-R-Control-1 | - | control | replicate 1 |
| SRR8265670 | XZ16-R-Salt-2 | RT-PCR | about 25-day-old | Root | Tibetan wild barley accession XZ16 | XZ16-R-Salt-2 | China: Qinghai Tibet Plateau | 200mM NaCl | replicate 2 |
| SRR8265671 | GP-R-Salt | RT-PCR | about 25-day-old | Root | Golden Promise | GP-R-Salt-1 | - | 200mM NaCl | replicate 1 |
| SRR8265672 | GP-S-Control-2 | RT-PCR | about 25-day-old | Shoot | Golden Promise | GP-S-Control-2 | - | control | replicate 2 |
| SRR8265673 | XZ16-R-Salt | RT-PCR | about 25-day-old | Root | Tibetan wild barley accession XZ16 | XZ16-R-Salt-1 | China: Qinghai Tibet Plateau | 200mM NaCl | replicate 1 |
| SRR8265674 | GP-S-Control | RT-PCR | about 25-day-old | Shoot | Golden Promise | GP-S-Control-1 | - | control | replicate 1 |
| SRR8265675 | GP-R-Salt-2 | RT-PCR | about 25-day-old | Root | Golden Promise | GP-R-Salt-2 | - | 200mM NaCl | replicate 2 |
| SRR8265676 | GP-S-Salt-2 | RT-PCR | about 25-day-old | Shoot | Golden Promise | GP-S-Salt-2 | - | 200mM NaCl | replicate 2 |
| SRR8265677 | GP-S-Salt | RT-PCR | about 25-day-old | Shoot | Golden Promise | GP-S-Salt-1 | - | 200mM NaCl | replicate 1 |
| SRR8265678 | XZ16-S-Control-2 | RT-PCR | about 25-day-old | Shoot | Tibetan wild barley accession XZ16 | XZ16-S-Control-2 | China: Qinghai Tibet Plateau | control | replicate 2 |
| SRR8265679 | XZ16-S-Control | RT-PCR | about 25-day-old | Shoot | Tibetan wild barley accession XZ16 | XZ16-S-Control-1 | China: Qinghai Tibet Plateau | control | replicate 1 |
| Run | Library Name | Library Selection | Stage | Tissue | Cultivar | Sample Name |
|---|---|---|---|---|---|---|
| SRR18652253 | BSMV-SDN1gs/+BYDV-1 | size fractionation | seedling | leaf | Golden Promise | BSMV-SDN1gs/+BYDV-1 |
| SRR18652254 | BSMV-EV/+BYDV-3 | size fractionation | seedling | leaf | Golden Promise | BSMV-EV/+BYDV-3 |
| SRR18652255 | BSMV-EV/+BYDV-2 | size fractionation | seedling | leaf | Golden Promise | BSMV-EV/+BYDV-2 |
| SRR18652256 | BSMV-EV/+BYDV-1 | size fractionation | seedling | leaf | Golden Promise | BSMV-EV/+BYDV-1 |
| SRR18652257 | BSMV-SDN1gs/-BYDV-3 | size fractionation | seedling | leaf | Golden Promise | BSMV-SDN1gs/-BYDV-3 |
| SRR18652258 | BSMV-SDN1gs/-BYDV-2 | size fractionation | seedling | leaf | Golden Promise | BSMV-SDN1gs/-BYDV-2 |
| SRR18652259 | BSMV-SDN1gs/-BYDV-1 | size fractionation | seedling | leaf | Golden Promise | BSMV-SDN1gs/-BYDV-1 |
| SRR18652260 | BSMV-EV/-BYDV-3 | size fractionation | seedling | leaf | Golden Promise | BSMV-EV/-BYDV-3 |
| SRR18652261 | BSMV-SDN1gs/+BYDV-3 | size fractionation | seedling | leaf | Golden Promise | BSMV-SDN1gs/+BYDV-3 |
| SRR18652262 | BSMV-SDN1gs/+BYDV-2 | size fractionation | seedling | leaf | Golden Promise | BSMV-SDN1gs/+BYDV-2 |
| SRR18652263 | BSMV-EV/-BYDV-2 | size fractionation | seedling | leaf | Golden Promise | BSMV-EV/-BYDV-2 |
| SRR18652264 | BSMV-EV/-BYDV-1 | size fractionation | seedling | leaf | Golden Promise | BSMV-EV/-BYDV-1 |
| Run | Library Name | Library Selection | Ecotype | Stage | Tissue | Cultivar | Sample Name |
|---|---|---|---|---|---|---|---|
| SRR18651738 | SB_4_1 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_4_1 |
| SRR18651739 | M_14_3 | size fractionation | WT | seedling stage | Root | Golden Promise | M_14_3 |
| SRR18651740 | M_14_2 | size fractionation | WT | seedling stage | Root | Golden Promise | M_14_2 |
| SRR18651741 | M_14_1 | size fractionation | WT | seedling stage | Root | Golden Promise | M_14_1 |
| SRR18651742 | M_7_3 | size fractionation | WT | seedling stage | Root | Golden Promise | M_7_3 |
| SRR18651743 | M_7_2 | size fractionation | WT | seedling stage | Root | Golden Promise | M_7_2 |
| SRR18651744 | M_7_1 | size fractionation | WT | seedling stage | Root | Golden Promise | M_7_1 |
| SRR18651745 | M_4_3 | size fractionation | WT | seedling stage | Root | Golden Promise | M_4_3 |
| SRR18651746 | SB_14_3 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_14_3 |
| SRR18651747 | SB_14_2 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_14_2 |
| SRR18651748 | SB_14_1 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_14_1 |
| SRR18651749 | SB_7_3 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_7_3 |
| SRR18651750 | SB_7_2 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_7_2 |
| SRR18651751 | SB_7_1 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_7_1 |
| SRR18651752 | SB_4_3 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_4_3 |
| SRR18651753 | SB_4_2 | size fractionation | SnRK1-YFP | seedling stage | Root | Golden Promise | SB_4_2 |
| SRR18651754 | M_4_2 | size fractionation | WT | seedling stage | Root | Golden Promise | M_4_2 |
| SRR18651755 | M_4_1 | size fractionation | WT | seedling stage | Root | Golden Promise | M_4_1 |
| Run | Library Name | Library Selection | Age | Tissue | Cultivar | Sample Name |
|---|---|---|---|---|---|---|
| SRR18331513 | FCH7NV5BBXY | RANDOM PCR | Triple mound | SAM | Morex | HVSAMTM |
| SRR18331514 | FCH7NV5BBXX | RANDOM PCR | Double ridge | SAM | Morex | HvSAMDR |
| Run | Library Name | Library Selection | Age | Tissue | Cultivar | Sample Name | Geographic Location Name |
|---|---|---|---|---|---|---|---|
| SRR18094627 | RSB15248_10 | RANDOM | 10 days | leaf | Margret | EVplus | Germany: Aachen |
| SRR18094628 | RSB15248_9 | RANDOM | 11 days | leaf | Margret | P40 | Germany: Aachen |
| SRR18094629 | RSB15248_8 | RANDOM | 11 days | leaf | Margret | P40 | Germany: Aachen |
| SRR18094630 | RSB15248_7 | RANDOM | 11 days | leaf | Margret | P40 | Germany: Aachen |
| SRR18094631 | RSB15248_6 | RANDOM | 11 days | leaf | - | Hau | Germany: Aachen |
| SRR18094632 | RSB15248_5 | RANDOM | 11 days | leaf | - | Hau | Germany: Aachen |
| SRR18094633 | RSB15248_4 | RANDOM | 11 days | leaf | - | Hau | Germany: Aachen |
| SRR18094634 | RSB15248_3 | RANDOM | 11 days | leaf | Margret | Epi | Germany: Aachen |
| SRR18094635 | RSB15248_18 | RANDOM | 11 days | leaf | - | Myc | Germany: Aachen |
| SRR18094636 | RSB15248_17 | RANDOM | 11 days | leaf | - | Myc | Germany: Aachen |
| SRR18094637 | RSB15248_16 | RANDOM | 11 days | leaf | - | Myc | Germany: Aachen |
| SRR18094638 | RSB15248_15 | RANDOM | 10 days | leaf | Margret | EVplus | Germany: Aachen |
| SRR18094639 | RSB15248_14 | RANDOM | 10 days | leaf | Margret | EVminus | Germany: Aachen |
| SRR18094640 | RSB15248_13 | RANDOM | 10 days | leaf | Margret | EVminus | Germany: Aachen |
| SRR18094641 | RSB15248_12 | RANDOM | 10 days | leaf | Margret | EVminus | Germany: Aachen |
| SRR18094642 | RSB15248_11 | RANDOM | 10 days | leaf | Margret | EVplus | Germany: Aachen |
| SRR18094643 | RSB15248_2 | RANDOM | 11 days | leaf | Margret | Epi | Germany: Aachen |
| SRR18094644 | RSB15248_1 | RANDOM | 11 days | leaf | Margret | Epi | Germany: Aachen |
| Run | Library Selection | Sample Name | Geographic Location Name |
|---|---|---|---|
| ERR4566424 | size fractionation | S12 | Australia |
| ERR4566423 | size fractionation | S2 | Australia |
| ERR4566422 | size fractionation | S0 | Australia |
| Run | Library Selection | Tissue | Cultivar | Sample Name | Treatment | Replicate |
|---|---|---|---|---|---|---|
| SRR13397555 | size fractionation | dry embryo + scutellum | Damazy | GSM5012470 | Rc - after seed regeneration; non-stored control | rep 1 |
| SRR13397554 | size fractionation | dry embryo + scutellum | Damazy | GSM5012469 | Rc - after seed regeneration; non-stored control | rep 3 |
| SRR13397553 | size fractionation | dry embryo + scutellum | Damazy | GSM5012469 | Rc - after seed regeneration; non-stored control | rep 2 |
| SRR13397552 | size fractionation | dry embryo + scutellum | Damazy | GSM5012467 | Rc - after seed regeneration; non-stored control | rep 1 |
| SRR13397551 | size fractionation | dry embryo + scutellum | Damazy | GSM5012466 | Lv - seeds after long-term storage 1972-2018 (germination 2%) | rep 3 |
| SRR13397550 | size fractionation | dry embryo + scutellum | Damazy | GSM5012465 | Lv - seeds after long-term storage 1972-2018 (germination 2%) | rep 2 |
| SRR13397549 | size fractionation | dry embryo + scutellum | Damazy | GSM5012464 | Lv - seeds after long-term storage 1972-2018 (germination 2%) | rep 1 |
| SRR13397548 | size fractionation | dry embryo + scutellum | Damazy | GSM5012463 | Hv - seeds after long-term storage 1972-2018 (germination 86,7%) | rep 3 |
| SRR13397547 | size fractionation | dry embryo + scutellum | Damazy | GSM5012462 | Hv - seeds after long-term storage 1972-2018 (germination 86,7%) | rep 2 |
| SRR13397546 | size fractionation | dry embryo + scutellum | Damazy | GSM5012461 | Hv - seeds after long-term storage 1972-2018 (germination 86,7%) | rep 1 |
| Run | Library Selection | Time | Tissue | Cultivar | Phenotype | Sample Name | Treatment |
|---|---|---|---|---|---|---|---|
| SRR13183018 | size fractionation | 7 days | shoot | XZ153 | low K tolerant | XZ153 | low K |
| SRR13183017 | size fractionation | 7 days | shoot | XZ153 | low K tolerant | XZ153 | low K |
| SRR13183016 | size fractionation | 7 days | shoot | XZ153 | low K tolerant | XZ153 | low K |
| SRR13183015 | size fractionation | 7 days | shoot | XZ153 | low K tolerant | XZ153 | control |
| SRR13183014 | size fractionation | 7 days | shoot | XZ153 | low K tolerant | XZ153 | control |
| SRR13183013 | size fractionation | 7 days | shoot | XZ153 | low K tolerant | XZ153 | control |
| SRR13183012 | size fractionation | 7 days | shoot | ZD9 | low K sensitive | ZD9 | low K |
| SRR13183011 | size fractionation | 7 days | shoot | ZD9 | low K sensitive | ZD9 | low K |
| SRR13183010 | size fractionation | 7 days | shoot | ZD9 | low K sensitive | ZD9 | low K |
| SRR13183009 | size fractionation | 7 days | shoot | ZD9 | low K sensitive | ZD9 | control |
| SRR13183008 | size fractionation | 7 days | shoot | ZD9 | low K sensitive | ZD9 | control |
| SRR13183007 | size fractionation | 7 days | shoot | ZD9 | low K sensitive | ZD9 | control |
| SRR13183006 | size fractionation | 2 days | shoot | XZ153 | low K tolerant | XZ153 | low K |
| SRR13183005 | size fractionation | 2 days | shoot | XZ153 | low K tolerant | XZ153 | low K |
| SRR13183004 | size fractionation | 2 days | shoot | XZ153 | low K tolerant | XZ153 | low K |
| SRR13183003 | size fractionation | 2 days | shoot | XZ153 | low K tolerant | XZ153 | control |
| SRR13183002 | size fractionation | 2 days | shoot | XZ153 | low K tolerant | XZ153 | control |
| SRR13183001 | size fractionation | 2 days | shoot | XZ153 | low K tolerant | XZ153 | control |
| SRR13183000 | size fractionation | 2 days | shoot | ZD9 | low K sensitive | ZD9 | low K |
| SRR13182999 | size fractionation | 2 days | shoot | ZD9 | low K sensitive | ZD9 | low K |
| SRR13182998 | size fractionation | 2 days | shoot | ZD9 | low K sensitive | ZD9 | low K |
| SRR13182997 | size fractionation | 2 days | shoot | ZD9 | low K sensitive | ZD9 | control |
| SRR13182996 | size fractionation | 2 days | shoot | ZD9 | low K sensitive | ZD9 | control |
| SRR13182995 | size fractionation | 2 days | shoot | ZD9 | low K sensitive | ZD9 | control |
| Run | Library Name | Age | Tissue | Cultivar | Sample Name | Geographic Location Name | Replicate |
|---|---|---|---|---|---|---|---|
| SRR11881520 | Hvu-1.0-1_M_sRNA-seq | 1.0 mm anther | Anther | Morex | Hvu-1.0-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881531 | Hvu-0.8-3_M_sRNA-seq | 0.8 mm anther | Anther | Morex | Hvu-0.8-3_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881552 | Hvu-0.8-1_M_sRNA-seq | 0.8 mm anther | Anther | Morex | Hvu-0.8-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881563 | Hvu-0.6-3_M_sRNA-seq | 0.6 mm anther | Anther | Morex | Hvu-0.6-3_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881574 | Hvu-0.6-2_M_sRNA-seq | 0.6 mm anther | Anther | Morex | Hvu-0.6-2_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881585 | Hvu-0.6-1_M_sRNA-seq | 0.6 mm anther | Anther | Morex | Hvu-0.6-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881596 | Hvu-0.4-4_M_sRNA-seq | 0.4 mm anther | Anther | Morex | Hvu-0.4-4_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881605 | Hvu-1.8-3_GP_sRNA-seq | 1.8 mm anther | Anther | Golden Promise | Hvu-1.8-3_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881606 | Hvu-1.8-2_GP_sRNA-seq | 1.8 mm anther | Anther | Golden Promise | Hvu-1.8-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881607 | Hvu-0.4-2_M_sRNA-seq | 0.4 mm anther | Anther | Morex | Hvu-0.4-2_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881608 | Hvu-1.8-1_GP_sRNA-seq | 1.8 mm anther | Anther | Golden Promise | Hvu-1.8-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881609 | Hvu-1.4-3_GP_sRNA-seq | 1.4 mm anther | Anther | Golden Promise | Hvu-1.4-3_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881610 | Hvu-1.4-2_GP_sRNA-seq | 1.4 mm anther | Anther | Golden Promise | Hvu-1.4-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881611 | Hvu-1.4-1_GP_sRNA-seq | 1.4 mm anther | Anther | Golden Promise | Hvu-1.4-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881612 | Hvu-1.0-4_GP_sRNA-seq | 1.0 mm anther | Anther | Golden Promise | Hvu-1.0-4_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881613 | Hvu-0.8-2_M_sRNA-seq | 0.8 mm anther | Anther | Morex | Hvu-0.8-2_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881614 | Hvu-0.2-2_M_sRNA-seq | 0.2 mm anther | Anther | Morex | Hvu-0.2-2_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881615 | Hvu-0.2-1_M_sRNA-seq | 0.2 mm anther | Anther | Morex | Hvu-0.2-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881616 | Hvu-1.0-2_GP_sRNA-seq | 1.0 mm anther | Anther | Golden Promise | Hvu-1.0-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881617 | Hvu-1.0-1_GP_sRNA-seq | 1.0 mm anther | Anther | Golden Promise | Hvu-1.0-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881618 | Hvu-0.8-3_GP_sRNA-seq | 0.8 mm anther | Anther | Golden Promise | Hvu-0.8-3_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881619 | Hvu-0.8-2_GP_sRNA-seq | 0.8 mm anther | Anther | Golden Promise | Hvu-0.8-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881620 | Hvu-0.8-1_GP_sRNA-seq | 0.8 mm anther | Anther | Golden Promise | Hvu-0.8-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881621 | Hvu-0.4-1_M_sRNA-seq | 0.4 mm anther | Anther | Morex | Hvu-0.4-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881622 | Hvu-0.6-3_GP_sRNA-seq | 0.6 mm anther | Anther | Golden Promise | Hvu-0.6-3_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881623 | Hvu-0.6-2_GP_sRNA-seq | 0.6 mm anther | Anther | Golden Promise | Hvu-0.6-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881624 | Hvu-0.6-1_GP_sRNA-seq | 0.6 mm anther | Anther | Golden Promise | Hvu-0.6-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881625 | Hvu-0.4-3_GP_sRNA-seq | 0.4 mm anther | Anther | Golden Promise | Hvu-0.4-3_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881626 | Hvu-0.4-2_GP_sRNA-seq | 0.4 mm anther | Anther | Golden Promise | Hvu-0.4-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881627 | Hvu-0.4-1_GP_sRNA-seq | 0.4 mm anther | Anther | Golden Promise | Hvu-0.4-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881628 | Hvu-0.2-3_GP_sRNA-seq | 0.2 mm anther | Anther | Golden Promise | Hvu-0.2-3_GP_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881629 | Hvu-0.2-2_GP_sRNA-seq | 0.2 mm anther | Anther | Golden Promise | Hvu-0.2-2_GP_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881630 | Hvu-0.2-1_GP_sRNA-seq | 0.2 mm anther | Anther | Golden Promise | Hvu-0.2-1_GP_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881631 | Hvu-1.8-3_M_sRNA-seq | 1.8 mm anther | Anther | Morex | Hvu-1.8-3_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881632 | Hvu-0.2-3_M_sRNA-seq | 0.2 mm anther | Anther | Morex | Hvu-0.2-3_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881633 | Hvu-1.8-2_M_sRNA-seq | 1.8 mm anther | Anther | Morex | Hvu-1.8-2_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881634 | Hvu-1.8-1_M_sRNA-seq | 1.8 mm anther | Anther | Morex | Hvu-1.8-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881635 | Hvu-1.4-4_M_sRNA-seq | 1.4 mm anther | Anther | Morex | Hvu-1.4-4_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881636 | Hvu-1.4-3_M_sRNA-seq | 1.4 mm anther | Anther | Morex | Hvu-1.4-3_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881637 | Hvu-1.4-1_M_sRNA-seq | 1.4 mm anther | Anther | Morex | Hvu-1.4-1_M_sRNA-seq | USA: St. Louis | replicate 1 |
| SRR11881638 | Hvu-1.0-3_M_sRNA-seq | 1.0 mm anther | Anther | Morex | Hvu-1.0-3_M_sRNA-seq | USA: St. Louis | replicate 3 |
| SRR11881639 | Hvu-1.0-2_M_sRNA-seq | 1.0 mm anther | Anther | Morex | Hvu-1.0-2_M_sRNA-seq | USA: St. Louis | replicate 2 |
| SRR11881537 | Tae-1.8-3_F_sRNA-seq | 1.8 mm anther | Anther | Fielder | Tae-1.8-3_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881538 | Tae-1.8-2_F_sRNA-seq | 1.8 mm anther | Anther | Fielder | Tae-1.8-2_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881539 | Tae-1.8-1_F_sRNA-seq | 1.8 mm anther | Anther | Fielder | Tae-1.8-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| SRR11881540 | Tae-1.4-4_F_sRNA-seq | 1.4 mm anther | Anther | Fielder | Tae-1.4-4_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881541 | Tae-1.4-3_F_sRNA-seq | 1.4 mm anther | Anther | Fielder | Tae-1.4-3_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881542 | Tae-1.4-1_F_sRNA-seq | 1.0 mm anther | Anther | Fielder | Tae-1.4-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| SRR11881543 | Tae-1.0-3_F_sRNA-seq | 1.0 mm anther | Anther | Fielder | Tae-1.0-3_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881544 | Tae-1.0-2_F_sRNA-seq | 1.0 mm anther | Anther | Fielder | Tae-1.0-2_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881545 | Tae-1.0-1_F_sRNA-seq | 1.0 mm anther | Anther | Fielder | Tae-1.0-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| SRR11881546 | Tae-0.8-3_F_sRNA-seq | 0.8 mm anther | Anther | Fielder | Tae-0.8-3_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881547 | Tae-0.8-2_F_sRNA-seq | 0.8 mm anther | Anther | Fielder | Tae-0.8-2_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881548 | Tae-0.8-1_F_sRNA-seq | 0.8 mm anther | Anther | Fielder | Tae-0.8-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| SRR11881549 | Tae-0.6-3_F_sRNA-seq | 0.6 mm anther | Anther | Fielder | Tae-0.6-3_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881550 | Tae-0.6-2_F_sRNA-seq | 0.6 mm anther | Anther | Fielder | Tae-0.6-2_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881551 | Tae-0.6-1_F_sRNA-seq | 0.6 mm anther | Anther | Fielder | Tae-0.6-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| SRR11881553 | Tae-0.4-4_F_sRNA-seq | 0.4 mm anther | Anther | Fielder | Tae-0.4-4_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881554 | Tae-0.4-2_F_sRNA-seq | 0.4 mm anther | Anther | Fielder | Tae-0.4-2_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881555 | Tae-0.4-1_F_sRNA-seq | 0.4 mm anther | Anther | Fielder | Tae-0.4-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| SRR11881556 | Tae-0.2-3_F_sRNA-seq | 0.2 mm anther | Anther | Fielder | Tae-0.2-3_F_sRNA-seq | USA: St. Louis | biological replicate 3 |
| SRR11881557 | Tae-0.2-2_F_sRNA-seq | 0.2 mm anther | Anther | Fielder | Tae-0.2-2_F_sRNA-seq | USA: St. Louis | biological replicate 2 |
| SRR11881558 | Tae-0.2-1_F_sRNA-seq | 0.2 mm anther | Anther | Fielder | Tae-0.2-1_F_sRNA-seq | USA: St. Louis | biological replicate 1 |
| Run | Age | Tissue | Cultivar | Sample Name | Geographic Location Name | Replicate |
|---|---|---|---|---|---|---|
| SRR11833940 | Day 5 | microspore | Gobernadora | Day5_rep2 | Canada: Quebec | replicate 2 |
| SRR11833941 | Day 5 | microspore | Gobernadora | Day5_rep.1 | Canada: Quebec | replicate 1 |
| SRR11833942 | Day 2 | microspore | Gobernadora | Day2_rep4 | Canada: Quebec | replicate 4 |
| SRR11833943 | Day 2 | microspore | Gobernadora | Day2_rep3 | Canada: Quebec | replicate 3 |
| SRR11833944 | Day 2 | microspore | Gobernadora | Day2_rep2 | Canada: Quebec | replicate 2 |
| SRR11833945 | Day 2 | microspore | Gobernadora | Day2_rep1 | Canada: Quebec | replicate 1 |
| SRR11833946 | Day 0 | microspore | Gobernadora | Day0_rep4 | Canada: Quebec | replicate 4 |
| SRR11833947 | Day 0 | microspore | Gobernadora | Day0_rep3 | Canada: Quebec | replicate 3 |
| SRR11833951 | Day 5 | microspore | Gobernadora | Day5_rep4 | Canada: Quebec | replicate 4 |
| SRR11833952 | Day 5 | microspore | Gobernadora | Day5_rep3 | Canada: Quebec | replicate 3 |
| SRR11833953 | Day 0 | microspore | Gobernadora | Day0_rep2 | Canada: Quebec | replicate 2 |
| SRR11833954 | Day 0 | microspore | Gobernadora | Day0_rep1 | Canada: Quebec | replicate 1 |
| Run | Library Selection | Tissue | Cultivar | Sample Name | Replicate |
|---|---|---|---|---|---|
| SRR11153177 | size fractionation | root | Golden Promise | GSM4333095 | rep3 |
| SRR11153176 | size fractionation | shoot | Golden Promise | GSM4333094 | rep3 |
| SRR11153175 | size fractionation | root | Golden Promise | GSM4333093 | rep3 |
| SRR11153174 | size fractionation | shoot | Golden Promise | GSM4333092 | rep3 |
| SRR11153173 | size fractionation | root | Golden Promise | GSM4333091 | rep2 |
| SRR11153172 | size fractionation | shoot | Golden Promise | GSM4333090 | rep2 |
| SRR11153171 | size fractionation | root | Golden Promise | GSM4333089 | rep2 |
| SRR11153170 | size fractionation | shoot | Golden Promise | GSM4333088 | rep2 |
| SRR11153169 | size fractionation | root | Golden Promise | GSM4333087 | rep1 |
| SRR11153168 | size fractionation | root | Golden Promise | GSM4333086 | rep1 |
| SRR11153167 | size fractionation | shoot | Golden Promise | GSM4333085 | rep1 |
| SRR11153166 | size fractionation | shoot | Golden Promise | GSM4333084 | rep1 |
| Run | Library Selection | Tissue | Sample Name |
|---|---|---|---|
| SRR11098940 | size fractionation | root | GSM4318310 |
| SRR11098939 | size fractionation | root | GSM4318309 |
| SRR11098938 | size fractionation | root | GSM4318308 |
| SRR11098937 | size fractionation | root | GSM4318307 |
| SRR11098936 | size fractionation | root | GSM4318306 |
| SRR11098935 | size fractionation | root | GSM4318305 |
| SRR11098934 | size fractionation | shoot | GSM4318304 |
| SRR11098933 | size fractionation | shoot | GSM4318303 |
| SRR11098932 | size fractionation | shoot | GSM4318302 |
| SRR11098931 | size fractionation | shoot | GSM4318301 |
| SRR11098930 | size fractionation | shoot | GSM4318300 |
| SRR11098929 | size fractionation | shoot | GSM4318299 |
| Run | Library Selection | Tissue | Sample Name | Treatment |
|---|---|---|---|---|
| SRR11098909 | size fractionation | root | GSM4318279 | low Pi condition |
| SRR11098908 | size fractionation | shoot | GSM4318278 | low Pi condition |
| Run | Library Selection | Genotype | Timepoint | Tissue | Sample Name | Replicate |
|---|---|---|---|---|---|---|
| SRR7363414 | size fractionation | m19028 (mla6, Rar3, bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204658 | Rep 3 |
| SRR7363413 | size fractionation | m19028 (mla6, Rar3, bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204657 | Rep 2 |
| SRR7363412 | size fractionation | m19028 (mla6, Rar3, bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204656 | Rep 1 |
| SRR7363411 | size fractionation | m19028 (mla6, Rar3, bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204655 | Rep 3 |
| SRR7363410 | size fractionation | m19028 (mla6, Rar3, bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204654 | Rep 2 |
| SRR7363409 | size fractionation | m19028 (mla6, Rar3, bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204653 | Rep 1 |
| SRR7363408 | size fractionation | m19028 (mla6, Rar3, bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204652 | Rep 3 |
| SRR7363407 | size fractionation | m19028 (mla6, Rar3, bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204651 | Rep 2 |
| SRR7363406 | size fractionation | m19028 (mla6, Rar3, bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204650 | Rep 1 |
| SRR7363405 | size fractionation | m19028 (mla6, Rar3, bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204649 | Rep 3 |
| SRR7363404 | size fractionation | m19028 (mla6, Rar3, bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204648 | Rep 2 |
| SRR7363403 | size fractionation | m19028 (mla6, Rar3, bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204647 | Rep 1 |
| SRR7363402 | size fractionation | m19028 (mla6, Rar3, bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204646 | Rep 3 |
| SRR7363401 | size fractionation | m19028 (mla6, Rar3, bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204645 | Rep 2 |
| SRR7363400 | size fractionation | m19028 (mla6, Rar3, bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204644 | Rep 1 |
| SRR7363399 | size fractionation | m19028 (mla6, Rar3, bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204643 | Rep 3 |
| SRR7363398 | size fractionation | m19028 (mla6, Rar3, bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204642 | Rep 2 |
| SRR7363397 | size fractionation | m19028 (mla6, Rar3, bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204641 | Rep 1 |
| SRR7363396 | size fractionation | m19089 (Mla6, Rar3, bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204640 | Rep 3 |
| SRR7363395 | size fractionation | m19089 (Mla6, Rar3, bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204639 | Rep 2 |
| SRR7363394 | size fractionation | m19089 (Mla6, Rar3, bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204638 | Rep 1 |
| SRR7363393 | size fractionation | m19089 (Mla6, Rar3, bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204637 | Rep 3 |
| SRR7363392 | size fractionation | m19089 (Mla6, Rar3, bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204636 | Rep 2 |
| SRR7363391 | size fractionation | m19089 (Mla6, Rar3, bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204635 | Rep 1 |
| SRR7363390 | size fractionation | m19089 (Mla6, Rar3, bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204634 | Rep 3 |
| SRR7363389 | size fractionation | m19089 (Mla6, Rar3, bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204633 | Rep 2 |
| SRR7363388 | size fractionation | m19089 (Mla6, Rar3, bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204632 | Rep 1 |
| SRR7363387 | size fractionation | m19089 (Mla6, Rar3, bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204631 | Rep 3 |
| SRR7363386 | size fractionation | m19089 (Mla6, Rar3, bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204630 | Rep 2 |
| SRR7363385 | size fractionation | m19089 (Mla6, Rar3, bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204629 | Rep 1 |
| SRR7363384 | size fractionation | m19089 (Mla6, Rar3, bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204628 | Rep 3 |
| SRR7363383 | size fractionation | m19089 (Mla6, Rar3, bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204627 | Rep 2 |
| SRR7363382 | size fractionation | m19089 (Mla6, Rar3, bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204626 | Rep 1 |
| SRR7363381 | size fractionation | m19089 (Mla6, Rar3, bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204625 | Rep 3 |
| SRR7363380 | size fractionation | m19089 (Mla6, Rar3, bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204624 | Rep 2 |
| SRR7363379 | size fractionation | m19089 (Mla6, Rar3, bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204623 | Rep 1 |
| SRR7363378 | size fractionation | m11526 (Mla6, rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204622 | Rep 3 |
| SRR7363377 | size fractionation | m11526 (Mla6, rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204621 | Rep 2 |
| SRR7363376 | size fractionation | m11526 (Mla6, rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204620 | Rep 1 |
| SRR7363375 | size fractionation | m11526 (Mla6, rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204619 | Rep 3 |
| SRR7363374 | size fractionation | m11526 (Mla6, rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204618 | Rep 2 |
| SRR7363373 | size fractionation | m11526 (Mla6, rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204617 | Rep 1 |
| SRR7363372 | size fractionation | m11526 (Mla6, rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204616 | Rep 3 |
| SRR7363371 | size fractionation | m11526 (Mla6, rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204615 | Rep 2 |
| SRR7363370 | size fractionation | m11526 (Mla6, rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204614 | Rep 1 |
| SRR7363369 | size fractionation | m11526 (Mla6, rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204613 | Rep 3 |
| SRR7363368 | size fractionation | m11526 (Mla6, rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204612 | Rep 2 |
| SRR7363367 | size fractionation | m11526 (Mla6, rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204611 | Rep 1 |
| SRR7363366 | size fractionation | m11526 (Mla6, rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204610 | Rep 3 |
| SRR7363365 | size fractionation | m11526 (Mla6, rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204609 | Rep 2 |
| SRR7363364 | size fractionation | m11526 (Mla6, rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204608 | Rep 1 |
| SRR7363363 | size fractionation | m11526 (Mla6, rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204607 | Rep 3 |
| SRR7363362 | size fractionation | m11526 (Mla6, rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204606 | Rep 2 |
| SRR7363361 | size fractionation | m11526 (Mla6, rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204605 | Rep 1 |
| SRR7363360 | size fractionation | m18982 (mla6, Rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204604 | Rep 3 |
| SRR7363359 | size fractionation | m18982 (mla6, Rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204603 | Rep 2 |
| SRR7363358 | size fractionation | m18982 (mla6, Rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204602 | Rep 1 |
| SRR7363357 | size fractionation | m18982 (mla6, Rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204601 | Rep 3 |
| SRR7363356 | size fractionation | m18982 (mla6, Rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204600 | Rep 2 |
| SRR7363355 | size fractionation | m18982 (mla6, Rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204599 | Rep 1 |
| SRR7363354 | size fractionation | m18982 (mla6, Rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204598 | Rep 3 |
| SRR7363353 | size fractionation | m18982 (mla6, Rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204597 | Rep 2 |
| SRR7363352 | size fractionation | m18982 (mla6, Rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204596 | Rep 1 |
| SRR7363351 | size fractionation | m18982 (mla6, Rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204595 | Rep 3 |
| SRR7363350 | size fractionation | m18982 (mla6, Rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204594 | Rep 2 |
| SRR7363349 | size fractionation | m18982 (mla6, Rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204593 | Rep 1 |
| SRR7363348 | size fractionation | m18982 (mla6, Rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204592 | Rep 3 |
| SRR7363347 | size fractionation | m18982 (mla6, Rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204591 | Rep 2 |
| SRR7363346 | size fractionation | m18982 (mla6, Rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204590 | Rep 1 |
| SRR7363345 | size fractionation | m18982 (mla6, Rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204589 | Rep 3 |
| SRR7363344 | size fractionation | m18982 (mla6, Rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204588 | Rep 2 |
| SRR7363343 | size fractionation | m18982 (mla6, Rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204587 | Rep 1 |
| SRR7363342 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204586 | Rep 3 |
| SRR7363341 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204585 | Rep 2 |
| SRR7363340 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 48 HAI | Barley infected first leaf (PO:0007094) | GSM3204584 | Rep 1 |
| SRR7363339 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204583 | Rep 3 |
| SRR7363338 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204582 | Rep 2 |
| SRR7363337 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 32 HAI | Barley infected first leaf (PO:0007094) | GSM3204581 | Rep 1 |
| SRR7363336 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204580 | Rep 3 |
| SRR7363335 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204579 | Rep 2 |
| SRR7363334 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 24 HAI | Barley infected first leaf (PO:0007094) | GSM3204578 | Rep 1 |
| SRR7363333 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204577 | Rep 3 |
| SRR7363332 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204576 | Rep 2 |
| SRR7363331 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 20 HAI | Barley infected first leaf (PO:0007094) | GSM3204575 | Rep 1 |
| SRR7363330 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204574 | Rep 3 |
| SRR7363329 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204573 | Rep 2 |
| SRR7363328 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 16 HAI | Barley infected first leaf (PO:0007094) | GSM3204572 | Rep 1 |
| SRR7363327 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204571 | Rep 3 |
| SRR7363326 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204570 | Rep 2 |
| SRR7363325 | size fractionation | CI 16151 (Mla6, Rar3, Bln1) | 0 HAI | Barley infected first leaf (PO:0007094) | GSM3204569 | Rep 1 |
| Run | Library Name | Library Selection | Age | Tissue | Cultivar | Sample Name | Geographic Location Name |
|---|---|---|---|---|---|---|---|
| SRR8698934 | s2-2 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698935 | s2-3 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698936 | spike-3 | size fractionation | 68 days | spike | Rolap | sRNA-spike | Poland |
| SRR8698937 | s2-1 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698938 | spike-1 | size fractionation | 68 days | spike | Rolap | sRNA-spike | Poland |
| SRR8698939 | spike-2 | size fractionation | 68 days | spike | Rolap | sRNA-spike | Poland |
| SRR8698940 | 6w-2 | size fractionation | 6 weeks | whole plant | Rolap | sRNA-6w | Poland |
| SRR8698941 | 6w-3 | size fractionation | 6 weeks | whole plant | Rolap | sRNA-6w | Poland |
| SRR8698942 | k5-1 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698943 | k5-2 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698944 | k5-3 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698945 | as | size fractionation | flag leaf | whole plant | Rolap | pare-drough | Poland |
| SRR8698946 | ak | size fractionation | flag leaf | whole plant | Rolap | pare-drough | Poland |
| SRR8698947 | hk | size fractionation | missing | spike | Rolap | pare-spike | Poland |
| SRR8698948 | k2-1 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698949 | k2-2 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698950 | 3w-3 | size fractionation | 3 weeks | whole plant | Rolap | sRNA-3w | Poland |
| SRR8698951 | 6w-1 | size fractionation | 6 weeks | whole plant | Rolap | sRNA-6w | Poland |
| SRR8698952 | 3w-1 | size fractionation | 3 weeks | whole plant | Rolap | sRNA-3w | Poland |
| SRR8698953 | 3w-2 | size fractionation | 3 weeks | whole plant | Rolap | sRNA-3w | Poland |
| SRR8698954 | 2w-2 | size fractionation | 2 weeks | whole plant | Rolap | sRNA-2w | Poland |
| SRR8698955 | 2w-3 | size fractionation | 2 weeks | whole plant | Rolap | sRNA-2w | Poland |
| SRR8698956 | 1w-3 | size fractionation | 1 week | whole plant | Rolap | sRNA-1w | Poland |
| SRR8698957 | 2w-1 | size fractionation | 2 weeks | whole plant | Rolap | sRNA-2w | Poland |
| SRR8698958 | 1w-1 | size fractionation | 1 week | whole plant | Rolap | sRNA-1w | Poland |
| SRR8698959 | 1w-2 | size fractionation | 1 week | whole plant | Rolap | sRNA-1w | Poland |
| SRR8698960 | s5-3 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698961 | s5-2 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698962 | s5-1 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698963 | k3-3 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698964 | k3-2 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698965 | k3-1 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698966 | s3-3 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698967 | s3-2 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698968 | s3-1 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| SRR8698969 | k2-3 | size fractionation | flag leaf | whole plant | Rolap | sRNA-drought | Poland |
| Run | Library Name | Library Selection | Age | Tissue | Cultivar | Sample Name | Replicate |
|---|---|---|---|---|---|---|---|
| SRR7687211 | Root_WB-1_Cd1 | cDNA | 22 days | root | WB-1 | Root_C_Cd1 | WB-1_Cd_root_replication 1 |
| SRR7687212 | Root_WB-1_Cd2 | cDNA | 22 days | root | WB-1 | Root_C_Cd2 | WB-1_Cd_root_replication 2 |
| SRR7687213 | Root_GP_Cd1 | cDNA | 22 days | root | Golden Promise | Root_A_Cd1 | GP_Cd_root_replication 1 |
| SRR7687214 | Root_GP_Cd2 | cDNA | 22 days | root | Golden Promise | Root_A_Cd2 | GP_Cd_root_replication 2 |
| SRR7687215 | Root_WB-1_CK1 | cDNA | 22 days | root | WB-1 | Root_C_CK1 | WB-1_CK_root_replication 1 |
| SRR7687216 | Root_WB-1_CK2 | cDNA | 22 days | root | WB-1 | Root_C_CK2 | WB-1_CK_root_replication 2 |
| SRR7687217 | Root_GP_CK1 | cDNA | 22 days | root | Golden Promise | Root_A_CK1 | GP_CK_root_replication 1 |
| SRR7687218 | Root_GP_CK2 | cDNA | 22 days | root | Golden Promise | Root_A_CK2 | GP_CK_root_replication 2 |
| SRR7687219 | Shoot_WB-1_Cd1 | cDNA | 22 days | shoot | WB-1 | Shoot_C_Cd1 | WB-1_Cd_shoot_replication 1 |
| SRR7687220 | Shoot_WB-1_Cd2 | cDNA | 22 days | shoot | WB-1 | Shoot_C_Cd2 | WB-1_Cd_shoot_replication 2 |
| SRR7687221 | Shoot_GP_Cd1 | cDNA | 22 days | shoot | Golden Promise | Shoot_A_Cd1 | GP_Cd_shoot_replication 1 |
| SRR7687222 | Shoot_GP_Cd2 | cDNA | 22 days | shoot | Golden Promise | Shoot_A_Cd2 | GP_Cd_shoot_replication 2 |
| SRR7687223 | Shoot_WB-1_CK1 | cDNA | 22 days | shoot | WB-1 | Shoot_C_CK1 | WB-1_CK_shoot_replication 1 |
| SRR7687224 | Shoot_WB-1_CK2 | cDNA | 22 days | shoot | WB-1 | Shoot_C_CK2 | WB-1_CK_shoot_replication 2 |
| SRR7687225 | Shoot_GP_CK1 | cDNA | 22 days | shoot | Golden Promise | Shoot_A_CK1 | GP_CK_shoot_replication 1 |
| SRR7687226 | Shoot_GP_CK2 | cDNA | 22 days | shoot | Golden Promise | Shoot_A_CK2 | GP_CK_shoot_replication 2 |
| Run | Library Name | Library Selection | Ecotype | Age | Tissue | Cultivar | Sample Name | Replicate |
|---|---|---|---|---|---|---|---|---|
| SRR7543962 | XZ29-Al1 | cDNA | AI tolerant | 20 days | root | - | XZ29-Al1 | XZ29 Al replicate 1 |
| SRR7543963 | XZ29-Al2 | cDNA | AI tolerant | 20 days | root | - | XZ29-Al2 | XZ29 Al replicate 2 |
| SRR7543964 | XZ29 control1 | cDNA | AI tolerant | 20 days | root | - | XZ29 control1 | XZ29 control replicate 1 |
| SRR7543965 | XZ29 control2 | cDNA | AI tolerant | 20 days | root | - | XZ29 control2 | XZ29 control replicate 2 |
| SRR7543966 | Golden Promise-Al1 | cDNA | AI sensitive | 20 days | root | Golden Promise | Golden Promise-Al1 | GP Al replicate 1 |
| SRR7543967 | Golden Promise-Al2 | cDNA | AI sensitive | 20 days | root | Golden Promise | Golden Promise-Al2 | GP Al replicate 2 |
| SRR7543968 | Golden Promise control1 | cDNA | AI sensitive | 20 days | root | Golden Promise | Golden Promise control1 | GP control replicate 1 |
| SRR7543969 | Golden Promise control2 | cDNA | AI sensitive | 20 days | root | Golden Promise | Golden Promise control2 | GP control replicate 2 |
| Run | Library Name | Library Selection | Cultivar | Sample Name | Geographic Location Name |
|---|---|---|---|---|---|
| DRR107734 | Barley Small RNA | size fractionation | Morex | DRS051843 | Japan:Tsukuba |
| Run | Library Name | Library Selection | Stage | Tissue | Cultivar | Sample Name | Geographic Location Name |
|---|---|---|---|---|---|---|---|
| SRR5643510 | sRNA-seq_embryo-10DPA | size fractionation | Embryo, ten days post anthesis | Embryo | Golden Promise | Embryo-10DPA | China |
| SRR5643511 | sRNA-seq_seed-5DAG | size fractionation | Seeds, five days after germination | Seeds | Golden Promise | Seed-5DAG | China |
| SRR5643512 | sRNA-seq_seed-1DAG | size fractionation | Seeds, one day after germination | Seeds | Golden Promise | Seed-1DAG | China |
| Run | Library Name | Library Selection | stage | Tissue | Cultivar | Sample Name | Geographic Location Name | Replicate |
|---|---|---|---|---|---|---|---|---|
| SRR5054866 | SUB2126437 | size fractionation | 8 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_8_DPA_replicate2 | China:Northwest A&F University,Yangling, Shaanxi | replicate2 |
| SRR5054862 | SUB2126440 | size fractionation | 18 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_18_DPA_replicate1 | China:Northwest A&F University,Yangling, Shaanxi | replicate1 |
| SRR5054861 | SUB2126433 | size fractionation | 3 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_3_DPA_replicate1 | China:Northwest A&F University,Yangling, Shaanxi | replicate1 |
| SRR5054860 | SUB2126441 | size fractionation | 18 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_18_DPA_replicate2 | China:Northwest A&F University,Yangling, Shaanxi | replicate2 |
| SRR5054859 | SUB2126436 | size fractionation | 8 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_8_DPA_replicate1 | China:Northwest A&F University,Yangling, Shaanxi | replicate1 |
| SRR5054858 | SUB2126439 | size fractionation | 13 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_13_DPA_replicate2 | China:Northwest A&F University,Yangling, Shaanxi | replicate2 |
| SRR5054853 | SUB2126438 | size fractionation | 13 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_13_DPA_replicate1 | China:Northwest A&F University,Yangling, Shaanxi | replicate1 |
| SRR5054852 | SUB2126435 | size fractionation | 3 Days Post Anthesis | grain | Cliper | sRNA_seq_grain_3_DPA_replicate2 | China:Northwest A&F University,Yangling, Shaanxi | replicate2 |
| Run | Library Name | Library Selection | Stage | Tissue | Cultivar | Sample Name | Geographic Location Name | Treatment |
|---|---|---|---|---|---|---|---|---|
| SRR2481856 | barley_8h_t | size fractionation | seedling | all plant | Morex | barley_8h_t | China | salinity stress |
| SRR2481855 | barley_8h_ck | size fractionation | seedling | all plant | Morex | barley_8h_ck | China | control |
| SRR2481854 | barley_3h_t | size fractionation | seedling | all plant | Morex | barley_3h_t | China | salinity stress |
| SRR2481853 | barley_3h_ck | size fractionation | seedling | all plant | Morex | barley_3h_ck | China | control |
| SRR2481852 | barley_27h_t | size fractionation | seedling | all plant | Morex | barley_27h_t | China | salinity stress |
| SRR2481851 | barley_sRNA barley_27h_ck | size fractionation | seedling | all plant | Morex | barley_27h_ck | China | control |